It's not officially 'supported' yet but I can't think why it shouldn't work in most cases, as SQL Compare just reads recursively from a folder of scripts. Simply load the schema objects folder in the database project as a scripts folder data source in SQL Compare Pro.
Have you selected the 'Use case sensitive object definition' option? This is not selected by default, so you will need to navigate to the options tab and select it.
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Do let us know if this doesn't work.
Kind regards,
David Atkinson
Red Gate Software
Product Manager
Redgate Software
An Item with the same key has already been added.
A duplicate def'n found for stored procedure XYZ.. Ensure case sensitive option set correctly and all object creation scripts are valid.